General
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click | General | Selects an object on the image or an option in the main interface | |
| Selects multiple objects non-sequentially | ||
| Selects multiple objects sequentially | ||
Double left click | Confirms selection; enables text editing | ||
Right click | Opens the context menu for additional options | ||
Right click and drag | Pans across the display in the Image Panel | ||
Scroll wheel | Zooms in or out of the current field of view (FOV) in steps | ||
| Moves through time points | ||
Left click |
| Image Explorer | Selects multiple images for simultaneous viewing |
Main View (2D)
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click and drag | Pointer Tool | Initiates rubber band selection for selecting multiple objects | |
Zoom To Rectangle | Defines a rectangle to zoom to | ||
ROI Tool | Defines a rectangular region of interest (ROI) | ||
Left click and hold/drag | Magnifier Tool | Magnifies the selected location | |
Left click (and drag) | Minimap | Selects an image location to pan to | |
Scroll wheel |
| Main View (2D) | Moves through z-frames |
3D View
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click and drag | 3D View | Rotates scene freely | |
Scroll wheel click and drag | Zooms in or out smoothly | ||
Double left click on image | Pans to the selected location and sets the location as the pivot point for rotation | ||
Double left click on object | Zooms to the selected object and sets the center of that object as the pivot point for rotation | ||
Right click and drag |
| Spins the camera | |
| Zooms in or out of the scene smoothly | ||
| Rotates the scene about the center of view |
3D Plane View
Mouse interaction | Context | Function |
---|---|---|
Left click on a planar view | Plane Navigation Crosshairs for 3D Plane View | Places the Plane Navigation Crosshairs |
Clipping & Ortho Planes
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click and drag | Basic and Advanced Widgets for Clipping & Ortho Planes | Translates/Rotates the plane and/or the plane control widget | |
Scroll wheel |
| Clipping & Ortho Planes | Changes the plane position |
Regions of interest
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click and drag | Adjusts the position of the red ROI handle | ||
Right click and drag |
| Changes the box ROI extent in all three (3) spatial dimensions |
Annotations
Mouse interaction | Context | Function |
---|---|---|
Left click and drag | Draws regions based on current cursor location |
Outline Editor
Mouse interaction | Context | Function |
---|---|---|
Left click and drag | Draws regions based on current cursor location | |
Double left click | Confirms drawn shape |
Track Editor
Mouse interaction | Context | Function |
---|---|---|
Double left click | Connects or disconnects tracks |
Neuron Composer
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click | Predict Dendrite | Places a seed point for trace prediction based on cursor location and display line of sight Confirms a predicted trace | |
| Clips a predicted path at the clicked location | ||
Delete Dendrite Points | Deletes the clicked dendrite point | ||
Add Spine | Places a seed point for spine detection | ||
Add Soma | Places a seed point for soma detection | ||
EM Create: Create Dendrite | Places a dendrite point | ||
EM Create: Branch From Point | Selects a dendrite point to branch from | ||
Left click and drag | Draw Dendrite | Traces filaments based on cursor location and display line of sight | |
Connect Neurons | Specifies the dendrite points to connect; press the left mouse button on the first dendrite point, drag to the second dendrite point, and then release the mouse button |
Mesh Contour Editor
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click and drag | Draws regions based on current cursor location | ||
Scroll wheel |
| Changes brush radius |
Mesh Creator
Mouse interaction | Context | Function |
---|---|---|
Left click and drag | Mesh Creator: Intensity Chart | Adjusts the ISO minimum or maximum |
Right click and drag | Translates the ISO range, adjusting the minimum and maximum simultaneously |
Mesh Splitter
Mouse interaction | Context | Function |
---|---|---|
Left click and drag | Draws a line on the image volume to specify a cutting plane |
One Click Object Creator
Mouse interaction | Context | Function |
---|---|---|
Left click | Places a seed point for mesh creation |
Pixel Classifier
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click and drag | Draws regions based on current cursor location | ||
Scroll wheel |
| Adjusts the brush radius or search range | |
Left click | Pixel Classifier: Magic Wand | Places a seed point for painting prediction |
Charts
Mouse interaction | Keys | Context | Function |
---|---|---|---|
Left click and drag | Selection Cursor | Initiates rubber band selection for selecting multiple objects | |
Zoom | Defines a rectangle to zoom to | ||
Freehand Kymograph Line Tool | Draws a line for a kymograph | ||
| Draws a straight line for a kymograph | ||
Left click (and drag) | Moves the time cursor | ||
Right click and drag | Pans |
Tags
Mouse interaction | Context | Function |
---|---|---|
Left click | Places a tag |
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